Basically, there are 2 ways to solve this problem.

My 1st best suggestion; manually check the disk volume.

1. Start->My Computer
2. Select the Drive you want to perform the check by right click, select properties.
3. Choose the tools tab and then press the Check Now button.
4. Check 2 checkboxes then proceed the check.
5. It may take some minutes to be done.
6. Restart your computer and see if there is still got the auto check disk in windows.

If the 1st suggestion is not the way, there is still got another way to solve it.

2nd suggestion; manually cancel the auto check disk by run command.

1. Start-> Run…
2. Type this command chkntfs /x c: . The /x probably means cancel the desired auto check disk, where c: is the drive to be cancel the auto check disk. You will see the command prompt appear few seconds and disappear.
3. When it is disappear it is done.
4. After you perform this task, the cpu register changed. You can go to the registry editor to view by press Start-> Run… , type regedit. Then find the path HKEY_LOCAL_MACHINE\SYSTEM\CURRENTCONTROLSET\CONTROL\Session Manager.
5. You can see that there is the registry BootExecute changed its data to autocheck autochk /k:c *.
6. Restart your computer and see the results.

Thanks to Raymond that I finally settle this problem.
Reference: http://www.raymond.cc/blog/archives/2008/02/23/disable-or-stop-auto-chkdsk-during-windows-startup/